Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-gdp ribazoletransferase | DXC44_17850 | Not Available | Positive | 4183348 - 4184097 | 27738.7 |
| alpha-ribazole phosphatase | DXC44_17855 | Not Available | Positive | 4184091 - 4184621 | 20094.8 |
| duf1622 domain-containing protein | DXC44_17860 | Not Available | Positive | 4184673 - 4185014 | 12539.8 |
| hypothetical protein | DXC44_17865 | Not Available | Negative | 4185139 - 4185381 | 9308.48 |
| hypothetical protein | DXC44_17875 | Not Available | Negative | 4186149 - 4186400 | 9377.15 |
| hypothetical protein | DXC44_17880 | Not Available | Positive | 4186807 - 4187559 | 26795.6 |
| hypothetical protein | DXC44_17890 | Not Available | Positive | 4188354 - 4188659 | 10691.7 |
| hypothetical protein | DXC44_17895 | Not Available | Positive | 4189649 - 4190902 | 48858.8 |
| Trna-gly | Not Available | Not Available | Positive | 4191520 - 4191595 | Not Available |
| cobalamin biosynthesis protein cobd | DXC44_17905 | Not Available | Negative | 4191631 - 4192563 | 34501.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

