Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_17800 | Not Available | Negative | 4173863 - 4174357 | 18386.1 |
| phosphoserine phosphatase serb | DXC44_17805 | Not Available | Positive | 4174630 - 4175862 | 46069.1 |
| dead/deah box helicase | DXC44_17810 | Not Available | Positive | 4175883 - 4177160 | 47461.1 |
| hypothetical protein | DXC44_17815 | Not Available | Negative | 4177546 - 4177821 | 10175.2 |
| duf4738 domain-containing protein | DXC44_17820 | Not Available | Negative | 4177871 - 4178659 | 29405.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | DXC44_17825 | Not Available | Negative | 4178683 - 4179996 | 48150.3 |
| spor domain-containing protein | DXC44_17830 | Not Available | Positive | 4180115 - 4181245 | 42084.3 |
| fha domain-containing protein | DXC44_17835 | Not Available | Positive | 4181261 - 4181785 | 19818.0 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DXC44_17840 | Not Available | Positive | 4181790 - 4182299 | 19446.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DXC44_17845 | Not Available | Positive | 4182308 - 4183345 | 37449.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

