Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | DXC44_17650 | Not Available | Positive | 4133656 - 4135707 | 79969.5 |
| dna-binding response regulator | DXC44_17655 | Not Available | Positive | 4135835 - 4136599 | 29786.5 |
| wg repeat-containing protein | DXC44_17660 | Not Available | Positive | 4136865 - 4138559 | 63023.1 |
| hypothetical protein | DXC44_17665 | Not Available | Positive | 4138582 - 4139076 | 18020.2 |
| hypothetical protein | DXC44_17670 | Not Available | Positive | 4139227 - 4139712 | 18259.8 |
| hypothetical protein | DXC44_17675 | Not Available | Positive | 4139725 - 4140675 | 35079.1 |
| hypothetical protein | DXC44_17680 | Not Available | Positive | 4140683 - 4141618 | 34553.1 |
| wg repeat-containing protein | DXC44_17685 | Not Available | Positive | 4141630 - 4143477 | 68522.7 |
| hypothetical protein | DXC44_17690 | Not Available | Positive | 4143496 - 4144707 | 45862.6 |
| hypothetical protein | DXC44_17695 | Not Available | Positive | 4145135 - 4145377 | 8929.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

