Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_17600 | Not Available | Negative | 4122365 - 4122847 | 17559.9 |
| ecf transporter s component | DXC44_17605 | Not Available | Positive | 4122981 - 4123490 | 18481.4 |
| twin-arginine translocase tata/tate family subunit | DXC44_17610 | Not Available | Positive | 4123638 - 4123841 | 7276.18 |
| twin-arginine translocase subunit tatc | DXC44_17615 | Not Available | Positive | 4123848 - 4124678 | 32372.7 |
| alanine dehydrogenase | DXC44_17620 | Not Available | Negative | 4124765 - 4125856 | 38998.8 |
| m23 family peptidase | DXC44_17625 | Not Available | Positive | 4126050 - 4127720 | 62731.9 |
| dipeptidase | DXC44_17630 | Not Available | Positive | 4127763 - 4129403 | 61100.5 |
| phospho-sugar mutase | DXC44_17635 | Not Available | Positive | 4129717 - 4131462 | 64726.5 |
| eama family transporter | DXC44_17640 | Not Available | Positive | 4131645 - 4132565 | 34775.9 |
| aldose 1-epimerase family protein | DXC44_17645 | Not Available | Negative | 4132614 - 4133489 | 33987.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

