Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination factor nusb | DXC44_17550 | Not Available | Positive | 4110943 - 4111869 | 36291.4 |
| preprotein translocase subunit yajc | DXC44_17555 | Not Available | Positive | 4111926 - 4112240 | 11609.3 |
| ybbr-like domain-containing protein | DXC44_17560 | Not Available | Positive | 4112254 - 4113267 | 39038.4 |
| dephospho-coa kinase | DXC44_17565 | Not Available | Positive | 4113260 - 4113856 | 22356.1 |
| hypothetical protein | DXC44_17570 | Not Available | Positive | 4113923 - 4114363 | 16021.2 |
| atp-dependent chaperone clpb | DXC44_17575 | Not Available | Negative | 4115477 - 4118065 | 97149.7 |
| hypothetical protein | DXC44_17580 | Not Available | Positive | 4118340 - 4118921 | 21450.8 |
| lysr family transcriptional regulator | DXC44_17585 | Not Available | Positive | 4118934 - 4119830 | 34399.8 |
| putative sulfate exporter family transporter | DXC44_17590 | Not Available | Positive | 4119919 - 4120905 | 35064.0 |
| duf4010 domain-containing protein | DXC44_17595 | Not Available | Negative | 4120997 - 4122286 | 48232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

