Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-iminoacetate synthase thih | DXC44_01575 | Not Available | Negative | 416136 - 417266 | 43251.8 |
| flavodoxin family protein | DXC44_01580 | Not Available | Negative | 417355 - 417927 | 21328.5 |
| hypothetical protein | DXC44_01585 | Not Available | Negative | 417927 - 418442 | 19574.8 |
| phosphomethylpyrimidine synthase thic | DXC44_01590 | Not Available | Negative | 418464 - 420164 | 63475.9 |
| thiazole synthase | DXC44_01595 | Not Available | Negative | 420173 - 420946 | 27519.5 |
| thiamine phosphate synthase | DXC44_01600 | Not Available | Negative | 420964 - 421590 | 23065.1 |
| sulfur carrier protein this | DXC44_01605 | Not Available | Negative | 421580 - 421780 | 7153.82 |
| superoxide dismutase | DXC44_01610 | Not Available | Negative | 422166 - 422783 | 23314.6 |
| atp-dependent dna helicase | DXC44_01615 | Not Available | Positive | 422892 - 425282 | 91472.8 |
| carboxynorspermidine decarboxylase | DXC44_01620 | Not Available | Positive | 425315 - 426478 | 44398.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

