Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cadmium-translocating p-type atpase | DXC44_17345 | Not Available | Positive | 4067608 - 4069518 | 69038.6 |
| transcriptional regulator | DXC44_17350 | Not Available | Negative | 4069671 - 4070048 | 14348.7 |
| cupin domain-containing protein | DXC44_17355 | Not Available | Positive | 4070191 - 4070601 | 14765.6 |
| glycoside hydrolase | DXC44_17360 | Not Available | Negative | 4071110 - 4071565 | 17806.7 |
| duf3872 domain-containing protein | DXC44_17365 | Not Available | Negative | 4071613 - 4072116 | 19038.3 |
| dna primase | DXC44_17370 | Not Available | Negative | 4072113 - 4072973 | 32340.8 |
| conjugal transfer protein trao | DXC44_17375 | Not Available | Negative | 4072980 - 4073537 | 20636.1 |
| conjugative transposon protein tran | DXC44_17380 | Not Available | Negative | 4073534 - 4074448 | 35083.3 |
| conjugative transposon protein tram | DXC44_17385 | Not Available | Negative | 4074495 - 4075802 | 48585.1 |
| hypothetical protein | DXC44_17390 | Not Available | Negative | 4075741 - 4076064 | 12614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

