Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_17245 | Not Available | Negative | 4051934 - 4052113 | 7131.58 |
| hypothetical protein | DXC44_17250 | Not Available | Positive | 4052172 - 4053341 | 45627.0 |
| hypothetical protein | DXC44_17255 | Not Available | Positive | 4053345 - 4054223 | 34384.8 |
| duf4313 domain-containing protein | DXC44_17260 | Not Available | Positive | 4054245 - 4054898 | 25179.7 |
| hypothetical protein | DXC44_17265 | Not Available | Positive | 4055085 - 4055429 | 13307.0 |
| hypothetical protein | DXC44_17270 | Not Available | Positive | 4055448 - 4056425 | 38333.6 |
| duf4120 domain-containing protein | DXC44_17275 | Not Available | Positive | 4056459 - 4056752 | 11409.4 |
| hypothetical protein | DXC44_17280 | Not Available | Negative | 4056783 - 4056992 | 8103.99 |
| hypothetical protein | DXC44_17285 | Not Available | Positive | 4057052 - 4057990 | 36066.7 |
| hypothetical protein | DXC44_17290 | Not Available | Positive | 4057987 - 4058256 | 10985.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

