Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | DXC44_17195 | Not Available | Positive | 4037797 - 4038708 | 35942.5 |
| site-specific integrase | DXC44_17200 | Not Available | Positive | 4038808 - 4039914 | 42776.1 |
| glutaredoxin-related protein | DXC44_17205 | Not Available | Positive | 4040052 - 4040351 | 10826.8 |
| alpha/beta hydrolase | DXC44_17210 | Not Available | Positive | 4040354 - 4040944 | 22308.5 |
| hypothetical protein | DXC44_17215 | Not Available | Positive | 4041201 - 4041884 | 26134.0 |
| dna-binding protein | DXC44_17220 | Not Available | Positive | 4041951 - 4042319 | 14215.3 |
| hypothetical protein | DXC44_17225 | Not Available | Negative | 4042538 - 4044889 | 91524.7 |
| restriction endonuclease subunit m | DXC44_17230 | Not Available | Negative | 4044974 - 4047469 | 95660.9 |
| hypothetical protein | DXC44_17235 | Not Available | Negative | 4047858 - 4048778 | 35975.0 |
| hypothetical protein | DXC44_17240 | Not Available | Negative | 4048781 - 4051222 | 95322.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

