Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_17085 | Not Available | Positive | 4015607 - 4015870 | 10094.5 |
| upxy family transcription antiterminator | DXC44_17090 | Not Available | Positive | 4015886 - 4016446 | 21758.7 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | DXC44_17095 | Not Available | Positive | 4016508 - 4017629 | 41572.8 |
| polysaccharide export protein | DXC44_17100 | Not Available | Positive | 4017643 - 4018434 | 29233.5 |
| chromosome partitioning protein para | DXC44_17105 | Not Available | Positive | 4018449 - 4020863 | 89892.9 |
| nucleotide sugar dehydrogenase | DXC44_17115 | Not Available | Positive | 4021967 - 4023217 | 46742.7 |
| lipopolysaccharide biosynthesis protein | DXC44_17120 | Not Available | Positive | 4023251 - 4024711 | 54748.7 |
| glycosyltransferase family 8 protein | DXC44_17125 | Not Available | Positive | 4024708 - 4025670 | 37734.0 |
| hypothetical protein | DXC44_17130 | Not Available | Positive | 4025683 - 4026030 | 12893.2 |
| hypothetical protein | DXC44_17135 | Not Available | Positive | 4026291 - 4026677 | 14668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

