Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3986574 - 3986651 | Not Available |
| dna-binding response regulator | DXC44_16985 | Not Available | Positive | 3986720 - 3987370 | 24599.1 |
| trna 2-thiouridine(34) synthase mnma | DXC44_16990 | Not Available | Negative | 3987367 - 3988431 | 39768.7 |
| cysteine synthase a | DXC44_16995 | Not Available | Negative | 3988438 - 3989388 | 33551.6 |
| endonuclease/exonuclease/phosphatase family protein | DXC44_17000 | Not Available | Positive | 3989534 - 3990472 | 34976.7 |
| hypothetical protein | DXC44_17005 | Not Available | Positive | 3990500 - 3992956 | 89688.6 |
| atp-dependent helicase | DXC44_17010 | Not Available | Positive | 3993160 - 3994464 | 48236.5 |
| hypothetical protein | DXC44_17015 | Not Available | Positive | 3994473 - 3994682 | 7878.6 |
| hypothetical protein | DXC44_17025 | Not Available | Positive | 3995268 - 3995477 | 7868.87 |
| duf1566 domain-containing protein | DXC44_17030 | Not Available | Negative | 3995510 - 3997060 | 54947.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

