Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfotransferase | DXC44_16930 | Not Available | Positive | 3973931 - 3975037 | 43290.1 |
| hypothetical protein | DXC44_16935 | Not Available | Negative | 3975115 - 3976314 | 43736.0 |
| peroxide stress protein yaaa | DXC44_16940 | Not Available | Negative | 3976421 - 3977188 | 29374.4 |
| tlpa family protein disulfide reductase | DXC44_16945 | Not Available | Positive | 3977276 - 3977776 | 19123.4 |
| tonb-dependent receptor | DXC44_16950 | Not Available | Positive | 3977797 - 3980601 | 106534.0 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DXC44_16955 | Not Available | Negative | 3980667 - 3983888 | 119551.0 |
| hypothetical protein | DXC44_16960 | Not Available | Negative | 3984143 - 3984934 | 29912.6 |
| tryptophan--trna ligase | DXC44_16965 | Not Available | Positive | 3985038 - 3986132 | 41376.8 |
| Trna-val | Not Available | Not Available | Positive | 3986348 - 3986422 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 3986461 - 3986535 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

