Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | DXC44_16880 | Not Available | Positive | 3961780 - 3963138 | 52289.8 |
| hypothetical protein | DXC44_16885 | Not Available | Positive | 3963156 - 3964823 | 63810.3 |
| hypothetical protein | DXC44_16890 | Not Available | Positive | 3964826 - 3965122 | 11737.6 |
| dna mismatch repair endonuclease mutl | DXC44_16895 | Not Available | Positive | 3965144 - 3967012 | 68716.8 |
| hypothetical protein | DXC44_16900 | Not Available | Positive | 3967241 - 3968449 | 45833.1 |
| 3'(2'),5'-bisphosphate nucleotidase | DXC44_16905 | Not Available | Positive | 3968464 - 3969273 | 30250.0 |
| slc13/dass family transporter | DXC44_16910 | Not Available | Positive | 3969289 - 3970842 | 56645.7 |
| adenylyl-sulfate kinase | DXC44_16915 | Not Available | Positive | 3970872 - 3971486 | 22681.6 |
| sulfate adenylyltransferase subunit cysd | DXC44_16920 | Not Available | Positive | 3971498 - 3972409 | 35794.7 |
| sulfate adenylyltransferase subunit cysn | DXC44_16925 | Not Available | Positive | 3972446 - 3973903 | 54506.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

