Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DXC44_16765 | Not Available | Negative | 3937141 - 3937983 | 31481.2 |
| hypothetical protein | DXC44_16780 | Not Available | Negative | 3939973 - 3940377 | 15303.8 |
| duf177 domain-containing protein | DXC44_16785 | Not Available | Positive | 3941154 - 3941687 | 19819.5 |
| 50s ribosomal protein l32 | DXC44_16790 | Not Available | Positive | 3941699 - 3941884 | 6838.3 |
| ketoacyl-acp synthase iii | DXC44_16795 | Not Available | Positive | 3941989 - 3942993 | 36862.4 |
| gtpase era | DXC44_16800 | Not Available | Positive | 3943076 - 3943957 | 33673.8 |
| ribosome biogenesis gtpase der | DXC44_16805 | Not Available | Positive | 3943991 - 3945304 | 49388.4 |
| abc transporter atp-binding protein | DXC44_16810 | Not Available | Negative | 3945383 - 3946147 | 28911.9 |
| abc transporter permease | DXC44_16815 | Not Available | Negative | 3946144 - 3946887 | 27369.4 |
| lps export abc transporter atp-binding protein | DXC44_16820 | Not Available | Positive | 3947016 - 3947837 | 31018.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

