Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DXC44_16615 | Not Available | Negative | 3911967 - 3912824 | 32093.4 |
| 16s rrna processing protein rimm | DXC44_16620 | Not Available | Negative | 3912843 - 3913361 | 19831.7 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | DXC44_16625 | Not Available | Negative | 3913373 - 3914677 | 47644.1 |
| duf4290 domain-containing protein | DXC44_16630 | Not Available | Negative | 3914696 - 3915322 | 24903.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DXC44_16635 | Not Available | Negative | 3915369 - 3916058 | 25285.7 |
| yicc family protein | DXC44_16640 | Not Available | Positive | 3916154 - 3917029 | 33867.7 |
| guanylate kinase | DXC44_16645 | Not Available | Positive | 3917076 - 3917645 | 21367.4 |
| hypothetical protein | DXC44_16650 | Not Available | Positive | 3917650 - 3917832 | 6793.87 |
| nicotinate-nucleotide adenylyltransferase | DXC44_16655 | Not Available | Positive | 3917814 - 3918386 | 22162.7 |
| duf3836 domain-containing protein | DXC44_16660 | Not Available | Negative | 3918469 - 3918939 | 18198.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

