Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_01470 | Not Available | Positive | 391534 - 392124 | 21755.7 |
| duf2764 domain-containing protein | DXC44_01475 | Not Available | Positive | 392134 - 392970 | 32594.0 |
| v-type atp synthase subunit a | DXC44_01480 | Not Available | Positive | 392989 - 394743 | 65817.4 |
| v-type atp synthase subunit b | DXC44_01485 | Not Available | Positive | 394779 - 396101 | 48182.8 |
| v-type atp synthase subunit d | DXC44_01490 | Not Available | Positive | 396116 - 396721 | 23447.8 |
| v-type atp synthase subunit i | DXC44_01495 | Not Available | Positive | 396718 - 398523 | 67265.4 |
| v-type atp synthase subunit k | DXC44_01500 | Not Available | Positive | 398737 - 399201 | 15421.2 |
| glycosyl transferase | DXC44_01505 | Not Available | Positive | 399455 - 401125 | 63540.8 |
| alpha-glucan family phosphorylase | DXC44_01510 | Not Available | Positive | 401154 - 403718 | 98180.8 |
| is1182 family transposase | DXC44_01515 | Not Available | Negative | 403999 - 405612 | 63725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

