Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_16265 | Not Available | Negative | 3819838 - 3822966 | 117137.0 |
| arac family transcriptional regulator | DXC44_16270 | Not Available | Negative | 3823015 - 3823506 | 18676.4 |
| 4fe-4s dicluster domain-containing protein | DXC44_16275 | Not Available | Positive | 3824098 - 3824877 | 28534.3 |
| trna(5-methylaminomethyl-2-thiouridine)- methyltransferase | DXC44_16280 | Not Available | Positive | 3824877 - 3826004 | 42805.5 |
| aminopeptidase | DXC44_16285 | Not Available | Positive | 3826008 - 3828536 | 97607.4 |
| glycoside hydrolase | DXC44_16290 | Not Available | Negative | 3828542 - 3829579 | 38573.8 |
| carbohydrate kinase | DXC44_16295 | Not Available | Negative | 3829619 - 3830539 | 34622.3 |
| sis domain-containing protein | DXC44_16300 | Not Available | Negative | 3830650 - 3831252 | 21825.5 |
| tigr00730 family rossman fold protein | DXC44_16305 | Not Available | Negative | 3831270 - 3831806 | 19870.1 |
| insulinase family protein | DXC44_16310 | Not Available | Positive | 3831908 - 3833128 | 46475.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

