Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_16195 | Not Available | Negative | 3803713 - 3803922 | 7849.15 |
| atp-binding protein | DXC44_16200 | Not Available | Negative | 3804157 - 3805503 | 51388.8 |
| site-specific integrase | DXC44_16205 | Not Available | Negative | 3805675 - 3806781 | 42709.4 |
| hypothetical protein | DXC44_16220 | Not Available | Positive | 3807699 - 3810323 | 93904.3 |
| hypothetical protein | DXC44_16235 | Not Available | Positive | 3812411 - 3814024 | 60915.4 |
| hypothetical protein | DXC44_16240 | Not Available | Negative | 3814152 - 3815468 | 47507.9 |
| fimbrillin family protein | DXC44_16245 | Not Available | Negative | 3815465 - 3816460 | 37335.4 |
| aaa family atpase | DXC44_16250 | Not Available | Negative | 3816758 - 3818368 | 62447.3 |
| hypothetical protein | DXC44_16255 | Not Available | Positive | 3818416 - 3818637 | 8569.47 |
| hypothetical protein | DXC44_16260 | Not Available | Negative | 3818634 - 3819749 | 42040.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

