Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent protein deacetylase | DXC44_15875 | Not Available | Negative | 3745233 - 3746135 | 35196.3 |
| acyl-[acyl-carrier-protein] thioesterase | DXC44_15880 | Not Available | Positive | 3746366 - 3747121 | 29048.7 |
| radical sam mobile pair protein a | DXC44_15885 | Not Available | Positive | 3747189 - 3747866 | 26736.4 |
| radical sam mobile pair protein b | DXC44_15890 | Not Available | Positive | 3747851 - 3748732 | 33994.9 |
| hypothetical protein | DXC44_15895 | Not Available | Negative | 3748759 - 3748971 | 8081.8 |
| arac family transcriptional regulator | DXC44_15900 | Not Available | Negative | 3749029 - 3749946 | 36687.2 |
| is66 family transposase | DXC44_15905 | Not Available | Negative | 3750197 - 3751792 | 61243.5 |
| is66 family insertion sequence hypothetical protein | DXC44_15910 | Not Available | Negative | 3751881 - 3752243 | 14177.3 |
| is66 family insertion sequence hypothetical protein | DXC44_15915 | Not Available | Negative | 3752227 - 3752661 | 16601.3 |
| arac family transcriptional regulator | DXC44_15920 | Not Available | Positive | 3752859 - 3753398 | 20724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

