Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | DXC44_15815 | Not Available | Negative | 3734464 - 3735300 | 32716.5 |
| hypothetical protein | DXC44_15820 | Not Available | Negative | 3735311 - 3735886 | 22213.5 |
| site-specific integrase | DXC44_15830 | Not Available | Positive | 3736515 - 3737747 | 47034.3 |
| hypothetical protein | DXC44_15835 | Not Available | Positive | 3737770 - 3738159 | 14592.9 |
| helicase | DXC44_15840 | Not Available | Positive | 3738411 - 3739601 | 46573.8 |
| dna primase | DXC44_15845 | Not Available | Positive | 3739876 - 3740853 | 37165.4 |
| mobilization protein | DXC44_15850 | Not Available | Positive | 3741070 - 3742374 | 50543.4 |
| serine hydrolase | DXC44_15855 | Not Available | Positive | 3742768 - 3743595 | 31123.7 |
| hypothetical protein | DXC44_15865 | Not Available | Negative | 3744157 - 3744747 | 23453.9 |
| hypothetical protein | DXC44_15870 | Not Available | Negative | 3744804 - 3745220 | 16087.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

