Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein b | DXC44_15765 | Not Available | Negative | 3724773 - 3725474 | 26643.2 |
| peptidase | DXC44_15770 | Not Available | Negative | 3725480 - 3726589 | 44147.4 |
| prtrc system protein c | DXC44_15775 | Not Available | Negative | 3726626 - 3726847 | 8328.15 |
| prtrc system protein e | DXC44_15780 | Not Available | Negative | 3726892 - 3727914 | 38076.2 |
| hypothetical protein | DXC44_15785 | Not Available | Negative | 3728161 - 3728376 | 7835.54 |
| dna topoisomerase iii | DXC44_15790 | Not Available | Negative | 3728669 - 3730438 | 66792.2 |
| duf4099 domain-containing protein | DXC44_15795 | Not Available | Negative | 3730514 - 3730774 | 9558.32 |
| duf3945 domain-containing protein | DXC44_15800 | Not Available | Negative | 3730828 - 3732642 | 68860.4 |
| hypothetical protein | DXC44_15805 | Not Available | Negative | 3732961 - 3733146 | 6886.71 |
| duf4105 domain-containing protein | DXC44_15810 | Not Available | Negative | 3733243 - 3734439 | 46636.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

