Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rlob domain-containing protein | DXC44_15710 | Not Available | Positive | 3709576 - 3710154 | 22747.3 |
| hypothetical protein | DXC44_15720 | Not Available | Positive | 3711095 - 3712366 | 49840.5 |
| killer suppression protein higa | DXC44_15725 | Not Available | Positive | 3712846 - 3713184 | 13162.7 |
| imma/irre family metallo-endopeptidase | DXC44_15730 | Not Available | Positive | 3713192 - 3714283 | 41963.8 |
| hypothetical protein | DXC44_15735 | Not Available | Positive | 3714648 - 3715481 | 33771.5 |
| duf262 domain-containing protein | DXC44_15740 | Not Available | Negative | 3715891 - 3717627 | 67914.8 |
| duf2971 domain-containing protein | DXC44_15745 | Not Available | Positive | 3717913 - 3718971 | 42319.2 |
| hypothetical protein | DXC44_15750 | Not Available | Positive | 3719061 - 3723191 | 161654.0 |
| dna-binding protein | DXC44_15755 | Not Available | Positive | 3723633 - 3723938 | 11781.3 |
| prtrc system thif family protein | DXC44_15760 | Not Available | Negative | 3723994 - 3724776 | 29325.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

