Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | DXC44_01365 | Not Available | Positive | 367984 - 368688 | 26051.0 |
| hypothetical protein | DXC44_01370 | Not Available | Negative | 368704 - 369693 | 37752.0 |
| lipoyl synthase | DXC44_01375 | Not Available | Negative | 369751 - 370605 | 31713.2 |
| s9 family peptidase | DXC44_01380 | Not Available | Negative | 370703 - 372904 | 83309.9 |
| tigr01212 family radical sam protein | DXC44_01385 | Not Available | Positive | 372991 - 373917 | 35539.8 |
| fpra family a-type flavoprotein | DXC44_01390 | Not Available | Positive | 373933 - 375120 | 44710.8 |
| mechanosensitive ion channel family protein | DXC44_01395 | Not Available | Negative | 375216 - 376049 | 30653.8 |
| threonylcarbamoyl-amp synthase | DXC44_01400 | Not Available | Negative | 376098 - 376712 | 23089.2 |
| helicase | DXC44_01405 | Not Available | Negative | 376719 - 378719 | 76903.1 |
| spfh domain-containing protein | DXC44_01415 | Not Available | Positive | 379291 - 380241 | 35427.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

