Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain TF05-18
Accession NumberQSSN00000000.1
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage tail protein | DXC44_12075 | Not Available | + | 2761026 - 2761481 | 16095.8 |
| hypothetical protein | DXC44_12080 | Not Available | + | 2761546 - 2761839 | 11420.8 |
| hypothetical protein | DXC44_12085 | Not Available | + | 2761908 - 2762147 | 9350.11 |
| 1_nc_021791: putative tail length tape measure protein | DXC44_12090 | Not Available | + | 2762150 - 2763928 | 63892.0 |
| hypothetical protein | DXC44_12095 | Not Available | + | 2763925 - 2765997 | 79714.2 |
| Long tail fiber distal subunit | DXC44_12100 | Not Available | + | 2765999 - 2768626 | 93261.4 |
| Attr | Not Available | Not Available | + | 2771778 - 2771789 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 257 - 365 | Not Available |
| low specificity l-threonine aldolase | DXC44_00005 | Not Available | - | 63 - 1079 | 37832.5 |
| tonb-dependent receptor | DXC44_00010 | Not Available | + | 1245 - 4010 | 104480.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
