Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cida/lrga family protein | DXC44_14415 | Not Available | Negative | 3353720 - 3354073 | 13036.8 |
| phosphate acetyltransferase | DXC44_14420 | Not Available | Positive | 3354276 - 3355289 | 35492.5 |
| acetate kinase | DXC44_14425 | Not Available | Positive | 3355315 - 3356511 | 42809.0 |
| udp-2,3-diacylglucosamine diphosphatase | DXC44_14430 | Not Available | Negative | 3356577 - 3357344 | 29795.7 |
| duf59 domain-containing protein | DXC44_14435 | Not Available | Negative | 3357476 - 3357796 | 11973.4 |
| dna repair protein radc | DXC44_14440 | Not Available | Negative | 3357833 - 3358522 | 25617.0 |
| glycosyltransferase | DXC44_14445 | Not Available | Negative | 3358596 - 3359585 | 37604.6 |
| elongation factor p | DXC44_14450 | Not Available | Negative | 3359687 - 3360253 | 21126.5 |
| 50s ribosomal protein l34 | DXC44_14455 | Not Available | Positive | 3360456 - 3360611 | 6019.34 |
| anaerobic sulfatase-maturation protein | DXC44_14460 | Not Available | Negative | 3360790 - 3362025 | 47965.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

