Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_14050 | Not Available | Negative | 3242214 - 3242987 | 29758.4 |
| tlpa family protein disulfide reductase | DXC44_14055 | Not Available | Negative | 3243099 - 3245207 | 80277.7 |
| thiol:disulfide interchange protein | DXC44_14060 | Not Available | Negative | 3245229 - 3246419 | 44886.9 |
| hypothetical protein | DXC44_14065 | Not Available | Negative | 3246450 - 3247793 | 51757.6 |
| m56 family peptidase | DXC44_14070 | Not Available | Negative | 3247804 - 3249690 | 70449.8 |
| blai/meci/copy family transcriptional regulator | DXC44_14075 | Not Available | Negative | 3249724 - 3250086 | 14012.8 |
| glucuronyl hydrolase | DXC44_14080 | Not Available | Negative | 3250297 - 3251520 | 46603.4 |
| glycoside hydrolase | DXC44_14085 | Not Available | Negative | 3251538 - 3253187 | 61837.3 |
| alpha-glucosidase | DXC44_14090 | Not Available | Negative | 3253341 - 3255278 | 73625.1 |
| hypothetical protein | DXC44_14095 | Not Available | Negative | 3255420 - 3258056 | 98744.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

