Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_14000 | Not Available | Positive | 3231504 - 3231782 | 10749.0 |
| peptide chain release factor 1 | DXC44_14005 | Not Available | Positive | 3231766 - 3232881 | 42032.6 |
| orotidine 5'-phosphate decarboxylase | DXC44_14010 | Not Available | Positive | 3232918 - 3233736 | 30601.6 |
| hd domain-containing protein | DXC44_14015 | Not Available | Positive | 3233825 - 3235060 | 47196.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DXC44_14020 | Not Available | Positive | 3235193 - 3236233 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DXC44_14025 | Not Available | Positive | 3236239 - 3237624 | 51127.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DXC44_14030 | Not Available | Positive | 3237641 - 3238408 | 27740.6 |
| hypothetical protein | DXC44_14035 | Not Available | Positive | 3238471 - 3239034 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DXC44_14040 | Not Available | Positive | 3239086 - 3239988 | 35088.3 |
| alpha-l-fucosidase | DXC44_14045 | Not Available | Positive | 3239997 - 3242036 | 76755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

