Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | DXC44_13950 | Not Available | Positive | 3219762 - 3220793 | 39595.6 |
| beta-n-acetylhexosaminidase | DXC44_13955 | Not Available | Positive | 3220850 - 3223156 | 85850.0 |
| hypothetical protein | DXC44_13960 | Not Available | Negative | 3223266 - 3223757 | 17873.6 |
| hypothetical protein | DXC44_13965 | Not Available | Negative | 3223776 - 3223997 | 8766.94 |
| carbon starvation protein a | DXC44_13970 | Not Available | Negative | 3223984 - 3225414 | 52243.5 |
| s-layer protein | DXC44_13975 | Not Available | Positive | 3225493 - 3227172 | 64186.7 |
| hypothetical protein | DXC44_13980 | Not Available | Positive | 3227338 - 3227553 | 7928.93 |
| cell filamentation protein fic | DXC44_13985 | Not Available | Negative | 3227521 - 3228519 | 39571.9 |
| hypothetical protein | DXC44_13990 | Not Available | Negative | 3228522 - 3229115 | 22584.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | DXC44_13995 | Not Available | Positive | 3230354 - 3231523 | 42663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

