Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_13850 | Not Available | Negative | 3191057 - 3192961 | 73722.6 |
| 6-bladed beta-propeller | DXC44_13855 | Not Available | Negative | 3193241 - 3194335 | 41999.6 |
| hypothetical protein | DXC44_13860 | Not Available | Negative | 3194424 - 3194672 | 9017.95 |
| duf1573 domain-containing protein | DXC44_13865 | Not Available | Negative | 3194914 - 3195780 | 33029.6 |
| hypothetical protein | DXC44_13870 | Not Available | Negative | 3195784 - 3196005 | 7893.65 |
| winged helix family transcriptional regulator | DXC44_13875 | Not Available | Positive | 3196259 - 3197257 | 38394.7 |
| hypothetical protein | DXC44_13880 | Not Available | Negative | 3198061 - 3199140 | 40392.0 |
| duf108 domain-containing protein | DXC44_13885 | Not Available | Positive | 3199437 - 3200225 | 28134.8 |
| dihydrofolate reductase | DXC44_13890 | Not Available | Negative | 3200208 - 3201092 | 32644.1 |
| molecular chaperone djla | DXC44_13895 | Not Available | Positive | 3201199 - 3201981 | 29022.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

