Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | DXC44_13795 | Not Available | Negative | 3173334 - 3174308 | 36638.5 |
| chloride channel protein | DXC44_13800 | Not Available | Negative | 3174322 - 3176115 | 66651.6 |
| threonylcarbamoyl-amp synthase | DXC44_13805 | Not Available | Negative | 3176133 - 3176708 | 21163.3 |
| n-acetylglucosamine-6-phosphate deacetylase | DXC44_13810 | Not Available | Negative | 3176875 - 3178038 | 42262.9 |
| acrb/acrd/acrf family protein | DXC44_13815 | Not Available | Negative | 3178129 - 3181305 | 121030.0 |
| tolc family protein | DXC44_13820 | Not Available | Negative | 3181302 - 3182789 | 56925.7 |
| acrb/acrd/acrf family protein | DXC44_13825 | Not Available | Negative | 3182776 - 3185856 | 115358.0 |
| efflux rnd transporter periplasmic adaptor subunit | DXC44_13830 | Not Available | Negative | 3185861 - 3186928 | 39187.2 |
| o-antigen ligase domain-containing protein | DXC44_13835 | Not Available | Negative | 3186981 - 3188630 | 61935.2 |
| signal peptidase i | DXC44_13845 | Not Available | Negative | 3190146 - 3191048 | 35303.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

