Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | DXC44_13695 | Not Available | Positive | 3151696 - 3152238 | 20263.0 |
| n-acetylmuramoyl-l-alanine amidase | DXC44_13700 | Not Available | Positive | 3152245 - 3153051 | 30760.1 |
| ribonuclease e/g | DXC44_13705 | Not Available | Negative | 3153223 - 3154797 | 59703.8 |
| integration host factor subunit beta | DXC44_13710 | Not Available | Negative | 3155036 - 3155311 | 10172.4 |
| a/g-specific adenine glycosylase | DXC44_13715 | Not Available | Positive | 3155491 - 3156549 | 40529.6 |
| single-stranded dna-binding protein | DXC44_13720 | Not Available | Positive | 3156564 - 3157031 | 17347.4 |
| gliding motility-associated protein glde | DXC44_13725 | Not Available | Positive | 3157068 - 3158420 | 50847.5 |
| siderophore biosynthesis protein | DXC44_13730 | Not Available | Positive | 3158429 - 3159055 | 24533.4 |
| two-component sensor histidine kinase | DXC44_13735 | Not Available | Negative | 3159526 - 3161307 | 68711.6 |
| dna-binding response regulator | DXC44_13740 | Not Available | Negative | 3161326 - 3162015 | 26203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

