Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 92 protein | DXC44_13545 | Not Available | Positive | 3110261 - 3112513 | 85450.5 |
| duf4982 domain-containing protein | DXC44_13550 | Not Available | Positive | 3112516 - 3115020 | 94151.0 |
| n-acetylglucosamine-6-phosphate deacetylase | DXC44_13555 | Not Available | Positive | 3115196 - 3116359 | 42267.2 |
| atp-binding cassette domain-containing protein | DXC44_13560 | Not Available | Negative | 3116583 - 3117236 | 24548.9 |
| hypothetical protein | DXC44_13565 | Not Available | Negative | 3117233 - 3118162 | 35574.4 |
| hypothetical protein | DXC44_13570 | Not Available | Negative | 3118239 - 3118817 | 22985.1 |
| sigma-70 family rna polymerase sigma factor | DXC44_13575 | Not Available | Negative | 3118830 - 3119303 | 19000.9 |
| hypothetical protein | DXC44_13580 | Not Available | Negative | 3119455 - 3120126 | 25581.6 |
| dna-binding protein | DXC44_13585 | Not Available | Positive | 3120552 - 3121256 | 26967.6 |
| tolc family protein | DXC44_13590 | Not Available | Negative | 3121471 - 3122850 | 51471.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

