Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_13285 | Not Available | Positive | 3044870 - 3045214 | 12868.6 |
| tonb-dependent receptor | DXC44_13290 | Not Available | Positive | 3045341 - 3047518 | 81758.6 |
| arsenical-resistance protein | DXC44_13295 | Not Available | Negative | 3047767 - 3048813 | 38412.8 |
| arsenate reductase arsc | DXC44_13300 | Not Available | Negative | 3048826 - 3049254 | 15960.2 |
| arsenical pump-driving atpase | DXC44_13305 | Not Available | Negative | 3049259 - 3050971 | 62945.6 |
| arsenical resistance operon transcriptional repressor arsd | DXC44_13310 | Not Available | Negative | 3051000 - 3051326 | 12047.8 |
| sulfite exporter taue/safe family protein | DXC44_13315 | Not Available | Negative | 3051362 - 3052069 | 25781.8 |
| thioredoxin | DXC44_13320 | Not Available | Negative | 3052071 - 3052514 | 16803.2 |
| thioredoxin family protein | DXC44_13325 | Not Available | Negative | 3052525 - 3052758 | 8315.35 |
| arsr family transcriptional regulator | DXC44_13330 | Not Available | Negative | 3052836 - 3053162 | 12236.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

