Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_13235 | Not Available | Negative | 3033310 - 3033735 | 15949.3 |
| lrp/asnc family transcriptional regulator | DXC44_13240 | Not Available | Positive | 3033927 - 3034397 | 17952.8 |
| magnesium and cobalt transport protein cora | DXC44_13245 | Not Available | Negative | 3034422 - 3035462 | 40193.7 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DXC44_13250 | Not Available | Negative | 3035705 - 3038251 | 96377.2 |
| nadph-dependent oxidoreductase | DXC44_13255 | Not Available | Positive | 3038596 - 3039336 | 28380.1 |
| chromosomal replication initiator protein dnaa | DXC44_13260 | Not Available | Negative | 3039421 - 3040827 | 53559.4 |
| mce family protein | DXC44_13265 | Not Available | Negative | 3041165 - 3042052 | 32671.6 |
| n-acetylmuramoyl-l-alanine amidase | DXC44_13270 | Not Available | Negative | 3042072 - 3043301 | 46293.8 |
| transporter | DXC44_13275 | Not Available | Positive | 3043458 - 3044414 | 35439.4 |
| hypothetical protein | DXC44_13280 | Not Available | Positive | 3044597 - 3044824 | 8722.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

