Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5017 domain-containing protein | DXC44_12970 | Not Available | Negative | 2962902 - 2964209 | 49274.1 |
| tonb-dependent receptor | DXC44_12975 | Not Available | Negative | 2964236 - 2966983 | 101307.0 |
| tonb-dependent receptor | DXC44_12980 | Not Available | Negative | 2967458 - 2970799 | 123082.0 |
| energy-dependent translational throttle protein etta | DXC44_12985 | Not Available | Negative | 2971169 - 2972857 | 63743.2 |
| mfs transporter | DXC44_12990 | Not Available | Negative | 2972895 - 2974061 | 43903.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DXC44_12995 | Not Available | Negative | 2974076 - 2974897 | 29580.9 |
| had family hydrolase | DXC44_13000 | Not Available | Negative | 2974950 - 2975600 | 24626.3 |
| mate family efflux transporter | DXC44_13005 | Not Available | Positive | 2975690 - 2977042 | 49414.7 |
| potassium/proton antiporter | DXC44_13010 | Not Available | Positive | 2977039 - 2978487 | 52867.7 |
| divalent metal cation transporter | DXC44_13015 | Not Available | Negative | 2978564 - 2979817 | 45790.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

