Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | DXC44_01095 | Not Available | Negative | 314092 - 314781 | 25746.8 |
| energy transducer tonb | DXC44_01100 | Not Available | Positive | 314967 - 315650 | 25649.9 |
| polyprenyl synthetase family protein | DXC44_01105 | Not Available | Positive | 315732 - 316709 | 36822.8 |
| tatd family deoxyribonuclease | DXC44_01110 | Not Available | Positive | 316711 - 317484 | 29324.4 |
| Trna-ser | Not Available | Not Available | Positive | 317652 - 317739 | Not Available |
| mota/tolq/exbb proton channel family protein | DXC44_01120 | Not Available | Positive | 317827 - 318600 | 27566.2 |
| hypothetical protein | DXC44_01125 | Not Available | Positive | 318608 - 319069 | 16708.9 |
| biopolymer transporter exbd | DXC44_01130 | Not Available | Positive | 319113 - 319703 | 22472.8 |
| biopolymer transporter exbd | DXC44_01135 | Not Available | Positive | 319703 - 320167 | 17906.9 |
| gnat family n-acetyltransferase | DXC44_01145 | Not Available | Negative | 320360 - 320896 | 21182.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

