Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DXC44_12665 | Not Available | Positive | 2891313 - 2893880 | 96391.0 |
| hypothetical protein | DXC44_12670 | Not Available | Positive | 2893911 - 2895128 | 45948.8 |
| gnat family n-acetyltransferase | DXC44_12675 | Not Available | Negative | 2895876 - 2896733 | 32371.6 |
| nuclear transport factor 2 family protein | DXC44_12680 | Not Available | Negative | 2896745 - 2897122 | 14256.0 |
| duf418 domain-containing protein | DXC44_12685 | Not Available | Positive | 2897211 - 2897519 | 11933.8 |
| dna methylase | DXC44_12690 | Not Available | Negative | 2897706 - 2903546 | 220158.0 |
| duf1896 domain-containing protein | DXC44_12695 | Not Available | Negative | 2903536 - 2903988 | 17341.2 |
| type ia dna topoisomerase | DXC44_12700 | Not Available | Negative | 2904393 - 2906483 | 77405.7 |
| duf4099 domain-containing protein | DXC44_12705 | Not Available | Negative | 2906543 - 2908120 | 60048.1 |
| dna-binding protein | DXC44_12710 | Not Available | Negative | 2908141 - 2908491 | 13878.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

