Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DXC44_12495 | Not Available | Negative | 2857821 - 2858054 | 8866.64 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | DXC44_12510 | Not Available | Negative | 2858744 - 2859118 | 14212.0 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DXC44_12515 | Not Available | Positive | 2859197 - 2859955 | 28075.6 |
| insulinase family protein | DXC44_12520 | Not Available | Positive | 2859956 - 2861242 | 48625.5 |
| phosphatidylinositol-4-phosphate 5-kinase | DXC44_12525 | Not Available | Positive | 2861314 - 2862432 | 42496.8 |
| inositol monophosphatase | DXC44_12530 | Not Available | Positive | 2862440 - 2863228 | 29098.5 |
| duf2461 domain-containing protein | DXC44_12535 | Not Available | Positive | 2863304 - 2863969 | 25851.7 |
| yhch/yjgk/yial family protein | DXC44_12540 | Not Available | Positive | 2864006 - 2864446 | 16248.5 |
| 1,4-alpha-glucan-branching enzyme | DXC44_12545 | Not Available | Positive | 2864475 - 2866502 | 78102.2 |
| hypothetical protein | DXC44_12550 | Not Available | Positive | 2866506 - 2867657 | 43986.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

