Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | DXC44_12445 | Not Available | Negative | 2847160 - 2848440 | 46829.6 |
| port family protein | DXC44_12450 | Not Available | Negative | 2848687 - 2849406 | 27401.5 |
| flavin reductase family protein | DXC44_12455 | Not Available | Negative | 2849416 - 2850003 | 21914.5 |
| aspartate carbamoyltransferase regulatory subunit | DXC44_12460 | Not Available | Negative | 2850009 - 2850476 | 17438.4 |
| aspartate carbamoyltransferase | DXC44_12465 | Not Available | Negative | 2850485 - 2851426 | 36259.7 |
| penicillin-binding protein | DXC44_12470 | Not Available | Positive | 2851587 - 2853914 | 88345.2 |
| hypothetical protein | DXC44_12475 | Not Available | Positive | 2854120 - 2854947 | 31935.4 |
| arac family transcriptional regulator | DXC44_12480 | Not Available | Negative | 2855022 - 2855945 | 36234.0 |
| fructose-6-phosphate aldolase | DXC44_12485 | Not Available | Negative | 2856097 - 2856753 | 23599.5 |
| abc transporter permease | DXC44_12490 | Not Available | Negative | 2856850 - 2857824 | 36423.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

