Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | DXC44_12280 | Not Available | Negative | 2807592 - 2809448 | 68719.0 |
| fic family protein | DXC44_12285 | Not Available | Negative | 2810216 - 2811505 | 49452.9 |
| hypothetical protein | DXC44_12295 | Not Available | Positive | 2812360 - 2812590 | 8606.1 |
| hypothetical protein | DXC44_12300 | Not Available | Positive | 2812778 - 2813116 | 12058.8 |
| hypothetical protein | DXC44_12310 | Not Available | Negative | 2813840 - 2814277 | 17051.9 |
| hypothetical protein | DXC44_12315 | Not Available | Negative | 2814285 - 2814806 | 19296.5 |
| hypothetical protein | DXC44_12320 | Not Available | Negative | 2814822 - 2815229 | 15379.3 |
| hypothetical protein | DXC44_12325 | Not Available | Negative | 2815233 - 2815715 | 18354.9 |
| wg repeat-containing protein | DXC44_12330 | Not Available | Negative | 2815732 - 2816568 | 32515.2 |
| aaa family atpase | DXC44_12340 | Not Available | Negative | 2818240 - 2819127 | 33512.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

