Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_12215 | Not Available | Positive | 2792324 - 2792707 | 14845.0 |
| hypothetical protein | DXC44_12235 | Not Available | Negative | 2794162 - 2794392 | 9075.28 |
| hypothetical protein | DXC44_12240 | Not Available | Positive | 2794399 - 2795253 | 31763.9 |
| acyltransferase | DXC44_12245 | Not Available | Negative | 2795360 - 2796520 | 44353.2 |
| m3 family peptidase | DXC44_12250 | Not Available | Negative | 2796701 - 2798806 | 79204.9 |
| abc transporter permease | DXC44_12255 | Not Available | Positive | 2799128 - 2801437 | 86414.7 |
| abc transporter atp-binding protein | DXC44_12260 | Not Available | Positive | 2801472 - 2802146 | 24853.2 |
| abc transporter permease | DXC44_12265 | Not Available | Positive | 2802166 - 2804478 | 87510.2 |
| abc transporter permease | DXC44_12270 | Not Available | Positive | 2804493 - 2806817 | 86932.1 |
| hypothetical protein | DXC44_12275 | Not Available | Negative | 2806878 - 2807315 | 17467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

