Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | DXC44_11935 | Not Available | Positive | 2738409 - 2739431 | 37851.1 |
| tetratricopeptide repeat protein | DXC44_11940 | Not Available | Positive | 2739441 - 2740148 | 27631.4 |
| protein batd | DXC44_11945 | Not Available | Positive | 2740188 - 2742023 | 67637.7 |
| tetratricopeptide repeat protein | DXC44_11950 | Not Available | Positive | 2742043 - 2742861 | 30670.3 |
| phosphatase pap2 family protein | DXC44_11955 | Not Available | Positive | 2742872 - 2743579 | 26838.5 |
| dna-binding protein | DXC44_11960 | Not Available | Positive | 2743709 - 2743978 | 9982.98 |
| universal stress protein | DXC44_11965 | Not Available | Positive | 2744054 - 2745181 | 43112.8 |
| atp-dependent helicase | DXC44_11970 | Not Available | Positive | 2745269 - 2745508 | 8735.83 |
| tigr03905 family tscpd domain-containing protein | DXC44_11975 | Not Available | Negative | 2745624 - 2745869 | 9080.04 |
| hypothetical protein | DXC44_12105 | Not Available | Positive | 2768602 - 2769693 | 39444.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

