Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | DXC44_11885 | Not Available | Positive | 2729287 - 2729475 | 7205.97 |
| duf4295 domain-containing protein | DXC44_11890 | Not Available | Positive | 2729485 - 2729640 | 5827.19 |
| signal recognition particle-docking protein ftsy | DXC44_11895 | Not Available | Positive | 2729814 - 2730773 | 34716.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DXC44_11900 | Not Available | Positive | 2730777 - 2732075 | 50090.1 |
| hu family dna-binding protein | DXC44_11905 | Not Available | Positive | 2732149 - 2732421 | 10202.5 |
| hu family dna-binding protein | DXC44_11910 | Not Available | Positive | 2732447 - 2733877 | 52669.7 |
| atpase | DXC44_11915 | Not Available | Positive | 2734161 - 2735156 | 37374.8 |
| duf58 domain-containing protein | DXC44_11920 | Not Available | Positive | 2735406 - 2736275 | 33730.5 |
| hypothetical protein | DXC44_11925 | Not Available | Positive | 2736281 - 2737378 | 41517.0 |
| vwa domain-containing protein | DXC44_11930 | Not Available | Positive | 2737398 - 2738396 | 37254.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

