Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter atp-binding protein | DXC44_11835 | Not Available | Positive | 2721458 - 2722684 | 45636.3 |
| proline/glycine betaine abc transporter permease | DXC44_11840 | Not Available | Positive | 2722681 - 2723505 | 29538.8 |
| glycine/betaine abc transporter substrate-binding protein | DXC44_11845 | Not Available | Positive | 2723508 - 2724350 | 31696.2 |
| dmt family transporter | DXC44_11850 | Not Available | Positive | 2724495 - 2725403 | 34083.1 |
| sugar o-acetyltransferase | DXC44_11855 | Not Available | Positive | 2725416 - 2725967 | 20072.3 |
| hypothetical protein | DXC44_11860 | Not Available | Negative | 2726027 - 2726245 | 8234.71 |
| type i methionyl aminopeptidase | DXC44_11865 | Not Available | Positive | 2726482 - 2727336 | 31857.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DXC44_11870 | Not Available | Positive | 2727360 - 2728379 | 36941.3 |
| cina family protein | DXC44_11875 | Not Available | Positive | 2728401 - 2728901 | 17534.8 |
| 50s ribosomal protein l28 | DXC44_11880 | Not Available | Positive | 2729006 - 2729266 | 9789.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

