Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had family hydrolase | DXC44_11785 | Not Available | Positive | 2712149 - 2712838 | 26385.9 |
| hypothetical protein | DXC44_11790 | Not Available | Negative | 2712835 - 2713080 | 9435.41 |
| hypothetical protein | DXC44_11795 | Not Available | Negative | 2713097 - 2713798 | 25515.1 |
| k(+)-transporting atpase subunit c | DXC44_11800 | Not Available | Negative | 2714072 - 2714641 | 20500.6 |
| k(+)-transporting atpase subunit b | DXC44_11805 | Not Available | Negative | 2714655 - 2716688 | 72476.1 |
| k+-transporting atpase subunit a | DXC44_11810 | Not Available | Negative | 2716722 - 2718428 | 61976.5 |
| potassium-transporting atpase subunit f | DXC44_11815 | Not Available | Negative | 2718455 - 2718535 | 3136.13 |
| o-acetyl-adp-ribose deacetylase | DXC44_11820 | Not Available | Positive | 2718803 - 2719429 | 22625.3 |
| hypothetical protein | DXC44_11825 | Not Available | Positive | 2719657 - 2719779 | 4404.27 |
| sigma-54-dependent fis family transcriptional regulator | DXC44_11830 | Not Available | Negative | 2719819 - 2721156 | 49977.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

