Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11725 | Not Available | Positive | 2702359 - 2702580 | 8376.32 |
| hypothetical protein | DXC44_11730 | Not Available | Negative | 2702638 - 2702895 | 10359.4 |
| hypothetical protein | DXC44_11735 | Not Available | Negative | 2702900 - 2703196 | 11473.9 |
| molybdenum abc transporter atp-binding protein | DXC44_11740 | Not Available | Negative | 2703209 - 2703541 | 12983.6 |
| ribonuclease p | DXC44_11745 | Not Available | Negative | 2703556 - 2703732 | 6637.75 |
| hypothetical protein | DXC44_11750 | Not Available | Negative | 2703751 - 2704047 | 11525.4 |
| glycoside hydrolase family 15 protein | DXC44_11765 | Not Available | Negative | 2705400 - 2707187 | 69821.9 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | DXC44_11770 | Not Available | Negative | 2707206 - 2709458 | 86545.3 |
| aspartate kinase | DXC44_11775 | Not Available | Positive | 2709819 - 2711165 | 50703.7 |
| chloramphenicol acetyltransferase | DXC44_11780 | Not Available | Positive | 2711477 - 2712112 | 24088.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

