Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hu family dna-binding protein | DXC44_11675 | Not Available | Positive | 2696846 - 2697127 | 10206.7 |
| hypothetical protein | DXC44_11680 | Not Available | Positive | 2697225 - 2697617 | 15136.8 |
| hypothetical protein | DXC44_11685 | Not Available | Negative | 2697677 - 2697991 | 12695.8 |
| nitrate abc transporter permease | DXC44_11690 | Not Available | Negative | 2698015 - 2698233 | 7782.63 |
| hypothetical protein | DXC44_11695 | Not Available | Negative | 2698461 - 2699150 | 26783.4 |
| hypothetical protein | DXC44_11700 | Not Available | Negative | 2699577 - 2700104 | 20778.0 |
| single-stranded dna-binding protein | DXC44_11705 | Not Available | Negative | 2700485 - 2700868 | 14379.1 |
| hypothetical protein | DXC44_11710 | Not Available | Positive | 2701082 - 2701276 | 7202.75 |
| fructan hydrolase | DXC44_11715 | Not Available | Negative | 2701626 - 2701841 | 8388.06 |
| hypothetical protein | DXC44_11720 | Not Available | Negative | 2701878 - 2702165 | 11430.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

