Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11575 | Not Available | Negative | 2675487 - 2675822 | 12596.5 |
| invertase | DXC44_11580 | Not Available | Positive | 2675946 - 2676605 | 25155.2 |
| duf3575 domain-containing protein | DXC44_11585 | Not Available | Positive | 2676928 - 2678178 | 47941.6 |
| duf5119 domain-containing protein | DXC44_11590 | Not Available | Positive | 2678175 - 2679203 | 38324.4 |
| fimbrillin family protein | DXC44_11595 | Not Available | Positive | 2679262 - 2680290 | 37975.6 |
| fimbrillin family protein | DXC44_11600 | Not Available | Positive | 2680430 - 2681404 | 34096.6 |
| hypothetical protein | DXC44_11605 | Not Available | Positive | 2681439 - 2682593 | 42195.6 |
| duf4906 domain-containing protein | DXC44_11610 | Not Available | Positive | 2682619 - 2684973 | 88221.2 |
| acyltransferase | DXC44_11615 | Not Available | Negative | 2685363 - 2686493 | 42267.5 |
| hypothetical protein | DXC44_11620 | Not Available | Negative | 2686671 - 2688077 | 52145.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

