Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11525 | Not Available | Positive | 2666259 - 2666507 | 9097.76 |
| abc transporter atp-binding protein | DXC44_11530 | Not Available | Negative | 2666805 - 2668535 | 64007.9 |
| class i sam-dependent methyltransferase | DXC44_11535 | Not Available | Negative | 2668548 - 2669168 | 23093.9 |
| abc transporter atp-binding protein | DXC44_11540 | Not Available | Negative | 2669179 - 2670984 | 66261.7 |
| hypothetical protein | DXC44_11545 | Not Available | Negative | 2671009 - 2671710 | 26214.2 |
| class i sam-dependent methyltransferase | DXC44_11550 | Not Available | Negative | 2671707 - 2672561 | 33006.8 |
| tetr/acrr family transcriptional regulator | DXC44_11555 | Not Available | Negative | 2672694 - 2673305 | 23587.8 |
| kila-n domain-containing protein | DXC44_11560 | Not Available | Positive | 2673556 - 2674365 | 30639.9 |
| crp/fnr family transcriptional regulator | DXC44_11565 | Not Available | Positive | 2674422 - 2674976 | 21872.4 |
| duf4405 domain-containing protein | DXC44_11570 | Not Available | Positive | 2675056 - 2675475 | 15410.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

