Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain TF05-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1462332 bp
Thymine Count
1450009 bp
Guanine Count
1075488 bp
Cytosine Count
1073971 bp
Genome Length
5062435 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC44_11470 | Not Available | Negative | 2658681 - 2659694 | 39003.7 |
| integrase | DXC44_11475 | Not Available | Negative | 2659687 - 2660946 | 47906.9 |
| hypothetical protein | DXC44_11485 | Not Available | Negative | 2661265 - 2661750 | 18937.9 |
| hypothetical protein | DXC44_11490 | Not Available | Negative | 2661834 - 2662028 | 7280.96 |
| gnat family n-acetyltransferase | DXC44_11495 | Not Available | Negative | 2662254 - 2662742 | 18865.8 |
| hypothetical protein | DXC44_11500 | Not Available | Negative | 2663199 - 2664113 | 34908.3 |
| hypothetical protein | DXC44_11505 | Not Available | Negative | 2664201 - 2664407 | 7928.75 |
| hypothetical protein | DXC44_11510 | Not Available | Negative | 2664491 - 2664685 | 7145.89 |
| hypothetical protein | DXC44_11515 | Not Available | Negative | 2664879 - 2665448 | 21950.9 |
| hypothetical protein | DXC44_11520 | Not Available | Negative | 2665596 - 2666177 | 22110.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

